STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37874.1Protocatechuate 3,4-dioxygenase, alpha subunit. (201 aa)    
Predicted Functional Partners:
EFL37873.1
Protocatechuate 3,4-dioxygenase, beta subunit.
 
 
 0.999
EFL37875.1
3-carboxy-cis,cis-muconate cycloisomerase.
 
 
 0.998
EFL37876.1
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase.
 
 
 0.993
EFL37899.1
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.784
EFL39614.1
Class II aldolase/adducin.
     
  0.776
EFL37900.1
Shikimate dehydrogenase; Belongs to the shikimate dehydrogenase family.
 
   
 0.707
EFL38084.1
3-oxoadipate enol-lactone hydrolase.
  
  
 0.697
EFL37872.1
MarR family transcriptional regulator.
       0.681
EFL42855.1
Catechol 2,3 dioxygenase.
  
  
 0.621
EFL38575.1
3-oxoadipate:succinyl-CoA transferase, A subunit.
 
 
 0.597
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.