STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37904.1PPOX class F420-dependent enzyme. (148 aa)    
Predicted Functional Partners:
EFL37905.1
Beta-lactamase.
       0.628
EFL39392.1
Oxidoreductase.
  
     0.569
EFL37589.1
Antar domain-containing protein.
  
     0.522
EFL42235.1
5,10-methylenetetrahydromethanopterin reductase.
  
   
 0.518
EFL40497.1
ANTAR domain-containing protein.
  
     0.496
EFL38478.1
Alkanesulfonate monooxygenase.
  
   
 0.485
EFL43030.1
Conserved hypothetical protein.
  
     0.481
whiB-3
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.467
EFL40261.1
Conserved hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
    0.457
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.