STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37912.1Zinc-binding dehydrogenase family oxidoreductase. (331 aa)    
Predicted Functional Partners:
EFL37913.1
Integral membrane protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.946
EFL37911.1
6-pyruvoyl tetrahydropterin synthase.
 
     0.945
EFL37910.1
Glycosyl transferase.
 
    0.927
EFL37908.1
Conserved hypothetical protein.
 
     0.910
EFL37909.1
Conserved hypothetical protein.
 
     0.820
EFL41469.1
Conserved hypothetical protein.
 
     0.774
EFL37705.1
Conserved hypothetical protein.
 
     0.773
EFL38537.1
Ferredoxin oxidoreductase, alpha subunit.
    
 0.695
EFL39776.1
Ferredoxin oxidoreductase, alpha subunit.
    
 0.695
EFL40863.1
PTS system, fructose-specific family, IIABC component.
     
  0.694
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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