Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL37933.1Conserved hypothetical protein. (470 aa)    
Predicted Functional Partners:
EFL37932.1
Conserved hypothetical protein.
 
     0.971
EFL37935.1
Conserved hypothetical protein.
 
     0.936
EFL37934.1
ATPase family associated with various cellular activities (AAA).
 
 
  0.926
EFL42076.1
Magnesium chelatase.
  
 0.829
EFL43224.1
ATPase AAA_5.
 
 
  0.799
EFL39600.1
ATPase family associated with various cellular activities (AAA).
 
 
  0.773
EFL40331.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
   
 
  0.652
EFL43279.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
   
 
  0.652
EFL42077.1
Cobaltochelatase, CobN subunit.
  
 0.533
EFL38817.1
Conserved hypothetical protein.
  
     0.470
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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