STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37966.1Secreted solute binding protein. (346 aa)    
Predicted Functional Partners:
EFL37968.1
Ribose import ATP-binding protein RbsA 1.
 
 0.998
EFL37967.1
ABC transporter integral membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.994
EFL38760.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
   
 0.974
EFL43408.1
Sugar ABC-type transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.970
EFL43195.1
ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
 0.967
EFL38759.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
   
 0.966
EFL41270.1
Ribose ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 
0.949
EFL43196.1
Ribose transport system permease RbsC; Belongs to the binding-protein-dependent transport system permease family.
 
 0.932
EFL43001.1
Ribose ABC transporter, ATP-binding protein.
 
 0.916
rbsA-2
Ribose import ATP-binding protein RbsA 1; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.904
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.