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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37986.1Cellulase. (887 aa)    
Predicted Functional Partners:
EFL37985.1
Cellulose 1,4-beta-cellobiosidase.
 
    
0.802
EFL42917.1
Endo-1,4-beta-xylanase Z.
 
   
 0.766
EFL41589.1
Glycosyl hydrolase family 10.
  
   
 0.760
EFL42916.1
Endo-1,4-beta-xylanase A.
  
   
 0.760
EFL42873.1
Endo-1,4-beta-xylanase B; Truncated CDS; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
     0.742
EFL42712.1
Secreted lyase.
  
     0.725
EFL42043.1
Secreted lyase.
  
     0.724
EFL38799.1
Secreted sugar hydrolase; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
  
     0.714
EFL41699.1
Ribosomal protein L18.
 
     0.675
EFL38261.1
Conserved hypothetical protein; Belongs to the glycosyl hydrolase 43 family.
  
     0.669
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.