STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37988.1Pterin-4-alpha-carbinolamine dehydratase. (101 aa)    
Predicted Functional Partners:
EFL37989.1
Xre family toxin-antitoxin system, antitoxin component.
       0.773
hmgA
Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate.
  
  
 0.707
EFL37899.1
4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.613
EFL39053.1
methylmalonyl-CoA epimerase.
  
  
 0.609
EFL41128.1
4-hydroxyphenylpyruvate dioxygenase.
  
  
 0.609
EFL42518.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
  
 
   0.584
EFL43183.1
Carboxylesterase.
    
   0.579
EFL43282.1
Conserved hypothetical protein.
    
   0.579
EFL41428.1
HIT family protein.
   
   0.566
EFL42407.1
HIT family protein.
   
   0.566
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.