STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38023.1Tetratricopeptide repeat family protein. (433 aa)    
Predicted Functional Partners:
EFL38760.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
    
 0.880
EFL38024.1
Acetyltransferase.
       0.822
EFL38759.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
    
 0.805
EFL38026.1
S9C (acylaminoacyl-peptidase) family peptidase.
       0.773
EFL38027.1
Peptidase family M20/M25/M40 protein.
       0.773
EFL39406.1
Integral membrane protein.
  
 
 0.681
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.673
EFL38411.1
Extracellular solute-binding domain-containing protein.
  
     0.650
EFL40889.1
Conserved hypothetical protein; Degrades oligopeptides; Belongs to the peptidase S41B family.
   
 
 0.638
EFL41427.1
Conserved hypothetical protein; Degrades oligopeptides; Belongs to the peptidase S41B family.
   
 
 0.638
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.