Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL38028.1Conserved hypothetical protein. (171 aa)    
Predicted Functional Partners:
EFL38029.1
Integral membrane sensor protein.
       0.793
EFL39469.1
Regulatory protein.
  
     0.605
EFL38027.1
Peptidase family M20/M25/M40 protein.
       0.549
EFL38026.1
S9C (acylaminoacyl-peptidase) family peptidase.
       0.539
EFL40125.1
Conserved hypothetical protein.
  
     0.508
EFL40473.1
Conserved hypothetical protein.
  
     0.476
EFL41190.1
Membrane protein.
  
     0.471
EFL41936.1
Integral membrane protein.
  
     0.467
EFL43266.1
Conserved hypothetical protein.
  
     0.462
EFL38903.1
Membrane protein.
  
     0.455
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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