Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL38030.1Efflux protein. (121 aa)    
Predicted Functional Partners:
EFL37823.1
Phosphorylase.
  
     0.676
EFL41006.1
Cardiolipin synthetase.
  
 
 0.665
EFL42248.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
 
  0.562
EFL41024.1
Secreted protein; Unextendable partial coding region.
  
     0.546
EFL41226.1
Conserved hypothetical protein.
  
     0.530
EFL39108.1
Conserved hypothetical protein.
  
 
  0.523
EFL43191.1
Conserved hypothetical protein.
  
  
  0.505
EFL43245.1
Integral membrane protein.
  
     0.497
EFL40499.1
Drug resistance transporter, EmrB/QacA subfamily.
 
      0.493
EFL39263.1
Conserved hypothetical protein.
 
  
 0.479
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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