Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL38032.1KanY protein. (147 aa)    
Predicted Functional Partners:
EFL38033.1
Radical SAM domain-containing protein.
  
    0.766
EFL38035.1
Acetyltransferase.
       0.664
EFL41564.1
Membrane protein.
  
     0.586
EFL39047.1
Conserved hypothetical protein.
  
     0.565
EFL38026.1
S9C (acylaminoacyl-peptidase) family peptidase.
       0.552
EFL38027.1
Peptidase family M20/M25/M40 protein.
       0.552
EFL38029.1
Integral membrane sensor protein.
       0.552
EFL41573.1
Drug transporter; Belongs to the major facilitator superfamily.
       0.552
EFL39266.1
Conserved hypothetical protein.
  
   
 0.479
EFL38031.1
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
       0.473
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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