Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL38040.1methylmalonyl-CoA mutase. (675 aa)    
Predicted Functional Partners:
EFL39051.1
LAO/AO transport system ATPase.
 0.999
EFL39053.1
methylmalonyl-CoA epimerase.
 
  
 0.976
EFL38043.1
acyl-CoA dehydrogenase.
 
 
 0.969
EFL38039.1
crotonyl-CoA reductase.
 
   
 0.964
EFL38537.1
Ferredoxin oxidoreductase, alpha subunit.
    
 0.961
EFL39776.1
Ferredoxin oxidoreductase, alpha subunit.
    
 0.961
EFL38041.1
Citrate (Pro-3S)-lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
 
   
 0.937
EFL38042.1
MaoC domain-containing protein.
 
  
 0.935
EFL39034.1
methylmalonyl-CoA mutase, subunit A 1.
 
0.904
EFL37899.1
4-hydroxyphenylpyruvate dioxygenase.
    
 0.899
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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