STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
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[Homology]
Score
EFL38041.1Citrate (Pro-3S)-lyase beta subunit; Belongs to the HpcH/HpaI aldolase family. (320 aa)    
Predicted Functional Partners:
EFL41889.1
Citrate lyase subunit beta.
  
  
  0.979
EFL38042.1
MaoC domain-containing protein.
 
 
 0.969
EFL38040.1
methylmalonyl-CoA mutase.
 
   
 0.937
EFL38039.1
crotonyl-CoA reductase.
 
  
  0.934
EFL38043.1
acyl-CoA dehydrogenase.
 
 
  0.910
EFL39170.1
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
    
 0.875
EFL39025.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.861
EFL38155.1
Malate synthase A; Belongs to the malate synthase family.
    
 0.856
EFL39496.1
propionyl-CoA carboxylase, beta subunit.
    
 0.855
acsA
acetate-CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.852
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.