STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL38043.1acyl-CoA dehydrogenase. (401 aa)    
Predicted Functional Partners:
EFL38040.1
methylmalonyl-CoA mutase.
 
 
 0.969
EFL38042.1
MaoC domain-containing protein.
 
 0.948
EFL38039.1
crotonyl-CoA reductase.
 
  0.925
EFL42738.1
Electron transfer flavoprotein, alpha subunit.
 
 0.919
EFL43338.1
Fatty oxidation complex, alpha subunit.
  
 0.911
EFL38041.1
Citrate (Pro-3S)-lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
 
 
  0.910
EFL42737.1
Electron transfer flavoprotein, beta subunit.
 
 
 0.899
EFL37849.1
Fatty oxidation complex, alpha subunit.
  
 0.829
EFL38396.1
Fatty acid oxidation complex alpha-subunit.
  
 0.829
EFL43486.1
Non-ribosomal peptide synthetase/polyketide synthase Ta1; Truncated CDS; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.798
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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