STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL38054.1Beta-galactosidase. (1064 aa)    
Predicted Functional Partners:
EFL37816.1
Alpha-galactosidase C.
 
  
 0.916
EFL40204.1
Aldose-1-epimerase.
  
 
 0.786
EFL38801.1
Beta-galactosidase 1; Unextendable partial coding region.
 
 
 0.781
EFL37774.1
Beta-galactosidase; Truncated CDS.
 
 
 0.776
EFL43139.1
Beta-galactosidase.
 
 
 0.776
EFL40930.1
Galactokinase (Galactose kinase).
 
  
 0.761
EFL42669.1
Xylose isomerase.
    
 0.719
EFL38061.1
Sialidase.
    
 0.718
EFL42036.1
Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.681
EFL38253.1
Beta galactosidase small subunit.
  
  
 
0.672
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.