STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38061.1Sialidase. (168 aa)    
Predicted Functional Partners:
EFL39558.1
beta-N-Acetylglucosaminidase.
  
 0.907
EFL41109.1
beta-N-acetylhexosaminidase.
  
 0.907
EFL37816.1
Alpha-galactosidase C.
     
  0.850
EFL38253.1
Beta galactosidase small subunit.
 
  
 0.819
EFL38252.1
Glycosyl hydrolase, family 2; Unextendable partial coding region.
 
  
 0.815
EFL37472.1
Arylsulfatase A.
    
  0.788
EFL37774.1
Beta-galactosidase; Truncated CDS.
  
 0.740
EFL37890.1
6-phospho-beta-glucosidase.
     
  0.740
EFL38801.1
Beta-galactosidase 1; Unextendable partial coding region.
  
 0.740
EFL41328.1
Glycosyl hydrolase, family 4.
     
  0.740
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.