Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL38063.1Bacterial extracellular solute-binding protein, family 5. (539 aa)    
Predicted Functional Partners:
EFL38065.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.996
EFL38064.1
ABC-type dipeptide/oligopeptide transport system, permease component.
 
  0.983
EFL38066.1
Dipeptide ABC transporter, ATP-binding protein DppF; Belongs to the ABC transporter superfamily.
 
  0.954
EFL42811.1
Oligopeptide/dipeptide ABC transporter, permease.
 
  0.914
EFL42812.1
ABC peptide transporter, permease component.
 
  0.896
EFL43421.1
Opine ABC transporter, permease.
 
  0.894
EFL38449.1
Transport permease.
 
  0.890
EFL43422.1
Dipeptide transport system permease DppB.
 
  0.890
EFL39313.1
Peptide ABC transporter, permease.
 
  0.889
EFL38448.1
Peptide ABC transporter, permease.
 
  0.887
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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