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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38063.1Bacterial extracellular solute-binding protein, family 5. (539 aa)    
Predicted Functional Partners:
EFL38065.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.991
EFL38064.1
ABC-type dipeptide/oligopeptide transport system, permease component.
 0.972
EFL38066.1
Dipeptide ABC transporter, ATP-binding protein DppF; Belongs to the ABC transporter superfamily.
 
 
  0.947
EFL42811.1
Oligopeptide/dipeptide ABC transporter, permease.
 
 0.854
EFL43421.1
Opine ABC transporter, permease.
 
 0.820
EFL42812.1
ABC peptide transporter, permease component.
 0.817
EFL39313.1
Peptide ABC transporter, permease.
 
 0.813
EFL38448.1
Peptide ABC transporter, permease.
 
 0.809
EFL38449.1
Transport permease.
 0.806
EFL43422.1
Dipeptide transport system permease DppB.
 0.806
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.