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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38065.1Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family. (656 aa)    
Predicted Functional Partners:
EFL38064.1
ABC-type dipeptide/oligopeptide transport system, permease component.
 
 0.997
EFL38063.1
Bacterial extracellular solute-binding protein, family 5.
 
 0.991
EFL42812.1
ABC peptide transporter, permease component.
 
 
 0.988
EFL38449.1
Transport permease.
 
 
 0.986
EFL38631.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein.
 
 
0.985
EFL39314.1
Peptide ABC transporter, permease.
 
 0.978
EFL39317.1
Oligopeptide ABC transporter, permease.
 
 
 0.975
EFL43422.1
Dipeptide transport system permease DppB.
 
 0.975
EFL38066.1
Dipeptide ABC transporter, ATP-binding protein DppF; Belongs to the ABC transporter superfamily.
 
 
0.972
EFL38546.1
Peptide/nickel/opine uptake family ABC transporter, permease.
 
 
 0.970
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.