Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL38065.1Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family. (656 aa)    
Predicted Functional Partners:
EFL38064.1
ABC-type dipeptide/oligopeptide transport system, permease component.
 
 0.999
EFL38063.1
Bacterial extracellular solute-binding protein, family 5.
 
 0.996
EFL42812.1
ABC peptide transporter, permease component.
 
 0.995
EFL38449.1
Transport permease.
 
 0.994
EFL39314.1
Peptide ABC transporter, permease.
 
 0.991
EFL39317.1
Oligopeptide ABC transporter, permease.
 
 0.990
EFL43422.1
Dipeptide transport system permease DppB.
 
 0.990
EFL38546.1
Peptide/nickel/opine uptake family ABC transporter, permease.
 
 0.988
EFL38964.1
Dipeptide transport system permease DppB.
 
 0.988
EFL38631.1
Oligopeptide/dipeptide ABC transporter, ATP-binding protein.
 
0.987
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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