STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38066.1Dipeptide ABC transporter, ATP-binding protein DppF; Belongs to the ABC transporter superfamily. (341 aa)    
Predicted Functional Partners:
EFL38064.1
ABC-type dipeptide/oligopeptide transport system, permease component.
 
  0.990
EFL38065.1
Peptide/opine/nickel uptake family ABC transporter, permease/ATP-binding protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
0.974
EFL38963.1
ABC transporter, permease.
  0.955
EFL38063.1
Bacterial extracellular solute-binding protein, family 5.
 
  0.954
EFL42811.1
Oligopeptide/dipeptide ABC transporter, permease.
  0.947
EFL43421.1
Opine ABC transporter, permease.
  0.944
EFL38448.1
Peptide ABC transporter, permease.
  0.936
EFL39319.1
ABC transporter integral membrane protein.
  0.935
EFL39313.1
Peptide ABC transporter, permease.
  0.934
EFL39314.1
Peptide ABC transporter, permease.
 
  0.922
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.