Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL38072.1Aminotransferase class III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (428 aa)    
Predicted Functional Partners:
EFL38073.1
Hydrolase.
 
 
 0.986
EFL41895.1
Glutamate synthase large subunit.
     
 0.928
EFL40837.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
  
 0.923
EFL39508.1
Aldehyde dehydrogenase; Overlaps another CDS with the same product name.
  
 0.897
EFL39623.1
Succinate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.897
EFL41288.1
Methylmalonate-semialdehyde dehydrogenase.
  
 0.897
EFL42204.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.897
EFL42655.1
Succinate-semialdehyde dehydrogenase.
  
 0.897
EFL43255.1
Succinate-semialdehyde dehydrogenase [NADP+] (SSDH).
  
 0.897
EFL38071.1
Dihydropyrimidinase.
 
   
 0.876
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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