STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38103.1Membrane protein. (524 aa)    
Predicted Functional Partners:
EFL39170.1
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
    
 
 0.972
EFL38104.1
Secreted protein.
 
     0.969
EFL38105.1
Conserved hypothetical protein.
 
     0.969
EFL38106.1
Tail lysozyme.
 
     0.968
EFL38107.1
Rhs element Vgr protein.
 
     0.947
EFL38108.1
LysM domain-containing protein.
 
     0.947
EFL38109.1
Conserved hypothetical protein.
 
     0.946
EFL40310.1
Non-specific serine/threonine protein kinase.
   
 
 0.924
EFL40311.1
Serine/threonine-protein kinase PksC.
   
 
 0.924
EFL40355.1
Non-specific serine/threonine protein kinase.
   
 
 0.924
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.