STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38105.1Conserved hypothetical protein. (652 aa)    
Predicted Functional Partners:
EFL38106.1
Tail lysozyme.
 
 
 0.999
EFL38108.1
LysM domain-containing protein.
 
 
 0.997
EFL38109.1
Conserved hypothetical protein.
 
 
 
 0.997
EFL38112.1
Phage tail sheath protein.
 
 
 0.997
EFL38111.1
Conserved hypothetical protein.
 
 
 
 0.995
EFL38104.1
Secreted protein.
 
    0.974
EFL38103.1
Membrane protein.
 
     0.969
EFL41621.1
Translation initiation factor IF-2.
  
 
 0.962
EFL38107.1
Rhs element Vgr protein.
 
   
 0.954
EFL38114.1
AAA family ATPase.
 
     0.812
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.