Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFL38124.1 | EFL38125.1 | SSRG_00928 | SSRG_00929 | Secreted protein. | Translation initiation factor IF-2. | 0.499 |
EFL38125.1 | EFL38124.1 | SSRG_00929 | SSRG_00928 | Translation initiation factor IF-2. | Secreted protein. | 0.499 |
EFL38125.1 | EFL38759.1 | SSRG_00929 | SSRG_01563 | Translation initiation factor IF-2. | Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name. | 0.835 |
EFL38125.1 | EFL38760.1 | SSRG_00929 | SSRG_01564 | Translation initiation factor IF-2. | Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name. | 0.869 |
EFL38125.1 | EFL39481.1 | SSRG_00929 | SSRG_02285 | Translation initiation factor IF-2. | Membrane protein. | 0.780 |
EFL38125.1 | EFL41079.1 | SSRG_00929 | SSRG_03883 | Translation initiation factor IF-2. | Cell division protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily. | 0.877 |
EFL38125.1 | EFL41868.1 | SSRG_00929 | SSRG_04672 | Translation initiation factor IF-2. | Conserved hypothetical protein. | 0.780 |
EFL38125.1 | EFL41923.1 | SSRG_00929 | SSRG_04727 | Translation initiation factor IF-2. | Tetratricopeptide repeat-containing protein. | 0.780 |
EFL38125.1 | EFL42983.1 | SSRG_00929 | SSRG_05787 | Translation initiation factor IF-2. | Conserved hypothetical protein. | 0.780 |
EFL38759.1 | EFL38125.1 | SSRG_01563 | SSRG_00929 | Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name. | Translation initiation factor IF-2. | 0.835 |
EFL38759.1 | EFL38760.1 | SSRG_01563 | SSRG_01564 | Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name. | Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name. | 0.999 |
EFL38759.1 | EFL39481.1 | SSRG_01563 | SSRG_02285 | Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name. | Membrane protein. | 0.806 |
EFL38759.1 | EFL41868.1 | SSRG_01563 | SSRG_04672 | Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name. | Conserved hypothetical protein. | 0.806 |
EFL38759.1 | EFL41923.1 | SSRG_01563 | SSRG_04727 | Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name. | Tetratricopeptide repeat-containing protein. | 0.806 |
EFL38759.1 | EFL42983.1 | SSRG_01563 | SSRG_05787 | Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name. | Conserved hypothetical protein. | 0.806 |
EFL38760.1 | EFL38125.1 | SSRG_01564 | SSRG_00929 | Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name. | Translation initiation factor IF-2. | 0.869 |
EFL38760.1 | EFL38759.1 | SSRG_01564 | SSRG_01563 | Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name. | Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name. | 0.999 |
EFL38760.1 | EFL39481.1 | SSRG_01564 | SSRG_02285 | Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name. | Membrane protein. | 0.838 |
EFL38760.1 | EFL41868.1 | SSRG_01564 | SSRG_04672 | Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name. | Conserved hypothetical protein. | 0.838 |
EFL38760.1 | EFL41923.1 | SSRG_01564 | SSRG_04727 | Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name. | Tetratricopeptide repeat-containing protein. | 0.838 |
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