Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL38133.1Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family. (457 aa)    
Predicted Functional Partners:
EFL38134.1
Deoxyribodipyrimidine photolyase.
 
   
 0.926
EFL38132.1
Helix-loop-helix' dimerization domain signature protein.
 
     0.857
EFL40841.1
Superoxide dismutase.
  
 
 0.751
EFL38136.1
Phytoene desaturase.
 
  
 0.687
ybeY
Metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.651
EFL40418.1
Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 
   0.622
EFL38523.1
Amine oxidase, flavin-containing.
 
   
 0.617
EFL40332.1
Rhodanese sulfurtransferase.
  
 
   0.602
EFL43508.1
Rhodanese sulfurtransferase.
  
 
   0.590
EFL39661.1
YjeF family protein.
  
   0.583
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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