STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38142.1Glucokinase. (227 aa)    
Predicted Functional Partners:
EFL37481.1
PTS system, IIBC component.
  
 0.925
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.899
EFL38059.1
Conserved hypothetical protein; Truncated CDS; unextendable partial coding region.
  
  
 
0.884
EFL42742.1
Glucokinase.
  
  
 
0.884
EFL39358.1
Polyphosphate-glucose phosphotransferase.
     
 0.880
EFL40691.1
Sugar kinase.
  
  
 
0.874
EFL37571.1
Phosphoglucomutase, alpha-D-glucose phosphate-specific.
     
 0.865
EFL40397.1
Inositol 1-phosphate synthase.
     
 0.864
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
  
 
 0.864
EFL42669.1
Xylose isomerase.
    
 0.857
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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