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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38143.1Sugar ABC transporter, ATP-binding protein. (263 aa)    
Predicted Functional Partners:
EFL38145.1
ABC-type sugar transport system.
 
 0.998
EFL38144.1
Sugar ABC-type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 0.987
EFL38328.1
Sugar ABC transporter substrate-binding protein.
 
 0.951
EFL42843.1
ABC-type sugar transport system.
 
 0.951
EFL42844.1
Sugar ABC-type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 0.945
EFL43407.1
Periplasmic binding protein/LacI transcriptional regulator.
 
 0.867
EFL42850.1
DNA-binding protein.
 
 0.831
EFL37967.1
ABC transporter integral membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 0.821
EFL41270.1
Ribose ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family.
 0.820
EFL43198.1
Sugar ABC transporter, solute-binding protein.
 
 0.820
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.