STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38168.1PE-PGRS family protein. (278 aa)    
Predicted Functional Partners:
EFL38169.1
3-dehydroquinate synthase.
 
     0.889
EFL38167.1
Conserved hypothetical protein.
 
     0.741
EFL38166.1
Monooxygenase.
 
  
 0.725
EFL38170.1
Fructose-bisphosphate aldolase.
 
     0.699
EFL38165.1
2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase.
  
 
  0.666
EFL40331.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
    
  0.646
EFL43279.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
    
  0.646
EFL38171.1
Aspartate kinase; Belongs to the aspartokinase family.
       0.626
EFL38164.1
Isochorismatase.
       0.568
EFL42174.1
Cupin domain-containing protein.
 
  
  0.517
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.