STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38169.13-dehydroquinate synthase. (367 aa)    
Predicted Functional Partners:
EFL38170.1
Fructose-bisphosphate aldolase.
 
 
 0.997
EFL38168.1
PE-PGRS family protein.
 
     0.889
EFL40448.1
Prephenate dehydratase.
  
  
 0.814
EFL42841.1
Deoxyribose-phosphate aldolase.
  
 
 0.798
aroQ
3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
     
  0.736
EFL39618.1
Chorismate mutase.
  
  
 0.687
EFL41901.1
Chorismate mutase.
  
  
 0.687
EFL38166.1
Monooxygenase.
       0.666
EFL38167.1
Conserved hypothetical protein.
       0.647
EFL38171.1
Aspartate kinase; Belongs to the aspartokinase family.
       0.632
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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