STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38181.1Conserved hypothetical protein. (546 aa)    
Predicted Functional Partners:
EFL37825.1
Squalene-hopene cyclase.
  
  
 
0.918
EFL38187.1
Diphosphomevalonate decarboxylase.
  
 
 0.770
EFL37827.1
Squalene synthase HpnD.
 
 
 0.746
EFL37828.1
Squalene synthase HpnC.
 
 
 0.746
EFL37826.1
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
 
  
 0.633
EFL37822.1
Hopanoid biosynthesis associated radical SAM protein HpnH.
 
   
 0.631
EFL38183.1
hydroxymethylglutaryl-CoA synthase.
  
 
 0.617
EFL39212.1
Cytochrome P450.
   
 0.591
EFL43010.1
Bifunctional P-450/NADPH-P450 reductase; Truncated CDS; unextendable partial coding region; Belongs to the cytochrome P450 family.
    
 0.575
EFL38186.1
Phosphomevalonate kinase.
  
  
 0.567
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.