STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38188.1Mevalonate kinase. (367 aa)    
Predicted Functional Partners:
EFL38187.1
Diphosphomevalonate decarboxylase.
 
 
 0.997
EFL38186.1
Phosphomevalonate kinase.
 
  
  0.990
EFL38184.1
Hydroxymethylglutaryl-coenzyme A reductase.
 
 0.989
fni
Isopentenyl-diphosphate delta-isomerase, type 2; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
 
  
 0.968
EFL38183.1
hydroxymethylglutaryl-CoA synthase.
 
 
 0.959
EFL43496.1
Polyketide TA biosynthesis protein TaC.
 
 
 0.831
EFL38189.1
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
  
  
 0.805
EFL37849.1
Fatty oxidation complex, alpha subunit.
     
 0.615
EFL38396.1
Fatty acid oxidation complex alpha-subunit.
     
 0.615
EFL43338.1
Fatty oxidation complex, alpha subunit.
     
 0.615
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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