Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL38193.1IucA/IucC family siderophore biosynthesis protein. (488 aa)    
Predicted Functional Partners:
EFL38194.1
Secreted protein; Overlaps another CDS with the same product name.
       0.793
EFL38195.1
Secreted protein; Overlaps another CDS with the same product name.
       0.793
EFL41230.1
Siderophore synthetase component.
 
  
  0.790
EFL40958.1
Integral membrane protein.
  
     0.662
EFL41232.1
Alcaligin biosynthesis enzyme.
 
  
 0.646
EFL41903.1
Alcaligin biosynthesis enzyme.
 
  
 0.639
EFL40793.1
Calcium binding protein.
  
     0.586
EFL41523.1
Membrane protein.
  
     0.586
EFL37877.1
Regulatory protein.
  
     0.573
EFL41173.1
Conserved hypothetical protein.
  
     0.552
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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