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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38193.1IucA/IucC family siderophore biosynthesis protein. (488 aa)    
Predicted Functional Partners:
EFL41230.1
Siderophore synthetase component.
 
  
  0.813
EFL38194.1
Secreted protein; Overlaps another CDS with the same product name.
       0.796
EFL38195.1
Secreted protein; Overlaps another CDS with the same product name.
       0.796
EFL41232.1
Alcaligin biosynthesis enzyme.
 
 
 0.744
EFL41903.1
Alcaligin biosynthesis enzyme.
 
 
 0.739
EFL41416.1
DNA polymerase III, delta subunit.
     
 0.716
EFL40958.1
Integral membrane protein.
  
     0.662
EFL40793.1
Calcium binding protein.
  
     0.586
EFL41523.1
Membrane protein.
  
     0.586
EFL37877.1
Regulatory protein.
  
     0.573
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.