Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL38196.1Transcriptional regulator. (108 aa)    
Predicted Functional Partners:
EFL41008.1
Membrane protein.
   
    0.791
EFL37657.1
LysR family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
   
    0.787
EFL39042.1
MarR family transcriptional regulator.
   
    0.773
EFL42001.1
DNA-binding protein.
   
    0.771
EFL38049.1
NAD-dependent deacetylase 2.
  
    0.767
cobB-2
NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
  
    0.767
EFL37413.1
Glyoxalase.
   
    0.765
EFL39780.1
Regulatory protein AfsR.
   
    0.761
EFL42539.1
Transcriptional regulator.
  
     0.717
EFL43401.1
PadR family transcriptional regulator.
  
     0.690
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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