STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38211.1N-acetylmuramoyl-L-alanine amidase. (227 aa)    
Predicted Functional Partners:
EFL39335.1
Peptidoglycan binding domain-containing protein.
 
      0.710
EFL41327.1
Kinase.
  
    0.585
EFL38209.1
Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
       0.551
EFL38210.1
Hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
       0.551
EFL38208.1
Chlorohydrolase.
       0.502
EFL38110.1
Conserved hypothetical protein.
  
     0.452
EFL38484.1
Sugar hydrolase.
  
 
  0.421
EFL38805.1
Beta-glucosidase.
  
 
  0.421
EFL41258.1
beta-N-Acetylglucosaminidase.
  
 
  0.421
EFL42884.1
beta-D-xylosidase; Truncated CDS; unextendable partial coding region.
  
 
  0.421
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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