STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38222.1Glyoxylate carboligase; Belongs to the TPP enzyme family. (594 aa)    
Predicted Functional Partners:
EFL38219.1
2-hydroxy-3-oxopropionate reductase.
 
 
 0.986
EFL38218.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
 
 
 0.984
EFL41130.1
Oxidoreductase, FAD-binding.
     
  0.944
EFL38155.1
Malate synthase A; Belongs to the malate synthase family.
    
 0.919
EFL43424.1
D-isomer specific 2-hydroxyacid dehydrogenase.
    
  0.847
EFL37961.1
Isomerase.
    
  0.780
EFL41474.1
Oxidoreductase.
  
 
 0.723
EFL42538.1
6-phosphogluconate dehydrogenase, NAD-binding.
  
 
 0.723
EFL42765.1
6-phosphogluconate dehydrogenase, NAD-binding.
  
 
 0.723
EFL37410.1
Oxidoreductase, FAD-binding.
     
 0.686
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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