STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38226.1Transcriptional regulator. (370 aa)    
Predicted Functional Partners:
EFL38227.1
LuxR-family transcriptional regulator.
 
     0.963
EFL43460.1
Heat shock protein; Belongs to the small heat shock protein (HSP20) family.
  
 
   0.654
EFL37743.1
Conserved hypothetical protein; Belongs to the small heat shock protein (HSP20) family.
  
 
   0.650
EFL39674.1
Integral membrane protein.
  
     0.530
EFL38225.1
LuxR family transcriptional regulator.
    
  0.497
EFL39523.1
TIGR02960 family RNA polymerase sigma-70 factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.479
EFL42565.1
Conserved hypothetical protein.
  
     0.473
EFL38190.1
Regulatory protein.
  
  
  0.465
EFL40851.1
Secreted protein.
  
     0.464
EFL39639.1
Conserved hypothetical protein.
  
     0.430
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.