STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38233.1Xanthine dehydrogenase subunit D. (796 aa)    
Predicted Functional Partners:
EFL37516.1
Xanthine dehydrogenase YagT iron-sulfur-binding subunit.
 0.999
EFL38234.1
2Fe-2S iron-sulfur cluster binding domain-containing protein.
 0.999
EFL41111.1
(2Fe-2S)-binding protein.
 0.999
EFL38235.1
Molybdopterin dehydrogenase, FAD-binding protein.
 0.997
EFL37515.1
Oxidoreductase, molybdopterin-binding subunit.
 0.967
EFL42975.1
Oxidoreductase, molybdopterin-binding subunit.
 
 0.964
EFL37537.1
Conserved hypothetical protein.
  
 0.886
EFL41110.1
Oxidoreductase.
 
  
  0.873
EFL38154.1
4-diphosphocytidyl-2C-methyl-D-erythritol synthase.
 
  
 0.835
EFL39504.1
Purine nucleotide phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
     
  0.816
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.