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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38261.1Conserved hypothetical protein; Belongs to the glycosyl hydrolase 43 family. (470 aa)    
Predicted Functional Partners:
EFL38262.1
alpha-N-arabinofuranosidase 2; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.934
EFL38260.1
Conserved hypothetical protein; Truncated CDS; unextendable partial coding region.
 
     0.891
EFL42917.1
Endo-1,4-beta-xylanase Z.
 
  
 0.864
EFL38548.1
Mucin-2.
 
 
 0.793
EFL37773.1
Galactosidase.
  
  
 0.776
EFL42315.1
alpha-N-arabinofuranosidase 1.
 
  
 0.773
EFL40607.1
Pectinesterase/pectate lyase protein.
 
   
 0.756
EFL42873.1
Endo-1,4-beta-xylanase B; Truncated CDS; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
  
 0.727
EFL41514.1
Glycoside Hydrolase family 43.
  
     0.709
EFL41589.1
Glycosyl hydrolase family 10.
 
  
 0.700
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.