STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38276.1Toxin-antitoxin system, toxin component. (85 aa)    
Predicted Functional Partners:
EFL38275.1
Xre family toxin-antitoxin system, antitoxin component.
 
     0.931
EFL42622.1
Conserved hypothetical protein.
  
     0.697
EFL39708.1
Xre family toxin-antitoxin system, antitoxin component.
 
     0.614
EFL42277.1
Conserved hypothetical protein.
  
     0.602
EFL38274.1
Regulatory protein.
       0.595
EFL42129.1
Sporulation-control protein.
  
     0.583
EFL38771.1
BldB protein.
  
     0.570
EFL38202.1
Xre family toxin-antitoxin system, antitoxin component.
 
   
 0.564
EFL37717.1
SpoOM protein.
  
     0.563
EFL39937.1
Xre family toxin-antitoxin system, antitoxin component.
 
   
 0.552
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.