EFL38308.1 protein (Streptomyces griseoflavus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

EFL38308.1

ABC transporter, permease. (304 aa)

Predicted Functional Partners:

EFL38306.1

0.999

EFL38307.1

0.999

EFL38533.1

0.988

EFL37474.1

0.987

EFL38532.1

0.987

EFL37473.1

0.959

EFL37475.1

0.834

EFL38309.1

0.803

EFL39909.1

0.801

EFL42807.1

0.801

Your Current Organism:

Streptomyces griseoflavus

NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFL37473.1	EFL37474.1	SSRG_00277	SSRG_00278	Taurine ABC transporter, taurine-binding protein.	Taurine ABC transporter, ATP-binding protein.	0.992
EFL37473.1	EFL37475.1	SSRG_00277	SSRG_00279	Taurine ABC transporter, taurine-binding protein.	Taurine ABC transporter, permease.	0.995
EFL37473.1	EFL38307.1	SSRG_00277	SSRG_01111	Taurine ABC transporter, taurine-binding protein.	ABC-type nitrate/taurine/sulfonate/bicarbonate transport system, ATPase component.	0.945
EFL37473.1	EFL38308.1	SSRG_00277	SSRG_01112	Taurine ABC transporter, taurine-binding protein.	ABC transporter, permease.	0.959
EFL37473.1	EFL38532.1	SSRG_00277	SSRG_01336	Taurine ABC transporter, taurine-binding protein.	ABC-type nitrate/taurine/sulfonate/bicarbonate transport system, ATPase component.	0.941
EFL37473.1	EFL39909.1	SSRG_00277	SSRG_02713	Taurine ABC transporter, taurine-binding protein.	FMN reductase.	0.742
EFL37473.1	EFL42807.1	SSRG_00277	SSRG_05611	Taurine ABC transporter, taurine-binding protein.	FMN reductase.	0.742
EFL37474.1	EFL37473.1	SSRG_00278	SSRG_00277	Taurine ABC transporter, ATP-binding protein.	Taurine ABC transporter, taurine-binding protein.	0.992
EFL37474.1	EFL37475.1	SSRG_00278	SSRG_00279	Taurine ABC transporter, ATP-binding protein.	Taurine ABC transporter, permease.	0.999
EFL37474.1	EFL38306.1	SSRG_00278	SSRG_01110	Taurine ABC transporter, ATP-binding protein.	Aliphatic sulfonates family ABC transporter, substrate-binding protein.	0.979
EFL37474.1	EFL38307.1	SSRG_00278	SSRG_01111	Taurine ABC transporter, ATP-binding protein.	ABC-type nitrate/taurine/sulfonate/bicarbonate transport system, ATPase component.	0.772
EFL37474.1	EFL38308.1	SSRG_00278	SSRG_01112	Taurine ABC transporter, ATP-binding protein.	ABC transporter, permease.	0.987
EFL37474.1	EFL38532.1	SSRG_00278	SSRG_01336	Taurine ABC transporter, ATP-binding protein.	ABC-type nitrate/taurine/sulfonate/bicarbonate transport system, ATPase component.	0.772
EFL37474.1	EFL38533.1	SSRG_00278	SSRG_01337	Taurine ABC transporter, ATP-binding protein.	Aliphatic sulfonates family ABC transporter, substrate-binding protein.	0.978
EFL37474.1	EFL39909.1	SSRG_00278	SSRG_02713	Taurine ABC transporter, ATP-binding protein.	FMN reductase.	0.871
EFL37474.1	EFL42807.1	SSRG_00278	SSRG_05611	Taurine ABC transporter, ATP-binding protein.	FMN reductase.	0.878
EFL37475.1	EFL37473.1	SSRG_00279	SSRG_00277	Taurine ABC transporter, permease.	Taurine ABC transporter, taurine-binding protein.	0.995
EFL37475.1	EFL37474.1	SSRG_00279	SSRG_00278	Taurine ABC transporter, permease.	Taurine ABC transporter, ATP-binding protein.	0.999
EFL37475.1	EFL38306.1	SSRG_00279	SSRG_01110	Taurine ABC transporter, permease.	Aliphatic sulfonates family ABC transporter, substrate-binding protein.	0.983
EFL37475.1	EFL38307.1	SSRG_00279	SSRG_01111	Taurine ABC transporter, permease.	ABC-type nitrate/taurine/sulfonate/bicarbonate transport system, ATPase component.	0.989

page 1 of 5

Server load: low (16%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About