Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL38328.1Sugar ABC transporter substrate-binding protein. (337 aa)    
Predicted Functional Partners:
EFL38760.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
   
 0.974
EFL38759.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
   
 0.966
EFL38143.1
Sugar ABC transporter, ATP-binding protein.
 
 0.935
EFL42845.1
Sugar ABC transporter, ATP-binding protein.
 
 0.935
EFL38144.1
Sugar ABC-type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.925
EFL42844.1
Sugar ABC-type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.925
EFL38406.1
Sugar ABC transporter, ATP-binding protein.
 
 0.761
EFL42840.1
IolB.
 
  
 0.729
EFL37666.1
Thioredoxin reductase.
   
 0.718
EFL37967.1
ABC transporter integral membrane protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.702
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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