Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL38338.1AP endonuclease, family 2. (267 aa)    
Predicted Functional Partners:
EFL38337.1
Oxidoreductase.
 
  
  0.975
EFL38340.1
Ribose 5-phosphate isomerase.
 
   
 0.933
EFL38339.1
Triosephosphate isomerase.
 
   
 0.927
EFL38342.1
Tartrate transporter.
 
    0.752
EFL40863.1
PTS system, fructose-specific family, IIABC component.
  
 
  0.691
EFL38429.1
L-fuculose phosphate aldolase.
    
  0.573
EFL42081.1
L-fuculose phosphate aldolase.
    
  0.573
EFL38172.1
Anthranilate synthase, phenazine specific.
    
  0.558
EFL38514.1
Anthranilate synthase, phenazine specific; Unextendable partial coding region.
    
  0.558
EFL41800.1
Anthranilate synthase, phenazine specific.
    
  0.558
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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