Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL38342.1Tartrate transporter. (476 aa)    
Predicted Functional Partners:
EFL41802.1
Conserved hypothetical protein.
  
 
 0.807
EFL38341.1
Dihydroxyacetone kinase, L subunit.
       0.791
EFL37487.1
Respiratory nitrate reductase, gamma subunit.
  
 
 0.770
EFL38338.1
AP endonuclease, family 2.
 
    0.752
EFL37484.1
Nitrate reductase, alpha subunit.
  
 
 0.741
EFL37722.1
Nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.741
EFL38337.1
Oxidoreductase.
 
     0.715
EFL37485.1
Nitrate reductase, beta subunit.
  
 
 0.709
EFL37721.1
Nitrate reductase, beta subunit; Unextendable partial coding region.
  
 
 0.709
EFL38339.1
Triosephosphate isomerase.
 
     0.695
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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