Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL38353.1Conserved hypothetical protein. (160 aa)    
Predicted Functional Partners:
EFL38354.1
Oxidoreductase, molybdopterin binding protein.
 
     0.970
EFL38355.1
Integral membrane protein.
 
     0.797
EFL41932.1
Histone acetyltransferase.
  
     0.593
EFL42295.1
Conserved hypothetical protein.
  
     0.539
EFL41785.1
Integral membrane protein.
  
     0.533
EFL40116.1
Type II restriction enzyme NaeI.
  
     0.479
EFL38349.1
NAD-dependent epimerase/dehydratase.
 
     0.456
EFL40602.1
Integral membrane protein.
  
     0.450
EFL38318.1
hydroxylacyl-CoA dehydrogenase.
  
     0.436
EFL41392.1
Integral membrane protein.
  
     0.431
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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