STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38355.1Integral membrane protein. (225 aa)    
Predicted Functional Partners:
EFL38354.1
Oxidoreductase, molybdopterin binding protein.
 
     0.876
EFL38349.1
NAD-dependent epimerase/dehydratase.
 
   
 0.818
EFL38353.1
Conserved hypothetical protein.
 
     0.797
der
Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
   
    0.776
EFL38351.1
Glycosyl transferase.
 
   
 0.745
EFL41302.1
ATP/GTP-binding protein.
   
    0.628
EFL37881.1
Membrane translocator.
  
     0.447
EFL40497.1
ANTAR domain-containing protein.
  
     0.436
EFL40868.1
Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase involved in purine salvage.
     
 0.424
EFL39424.1
Conserved hypothetical protein.
  
     0.406
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.