STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38361.1Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (193 aa)    
Predicted Functional Partners:
EFL38362.1
Sulfate transporter.
 
 0.990
EFL40059.1
Sulfate permease (SulP) family inorganic anion transporter.
 
 0.970
EFL41827.1
Carbonate dehydratase.
    
 0.906
EFL42580.1
Transferase hexapeptide repeat protein.
    
 0.892
EFL40060.1
Carbonate dehydratase.
 
 
0.839
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.818
EFL37599.1
Sulfate permease.
 
 0.815
EFL38363.1
SPFH domain/band 7 family domain-containing protein.
       0.808
EFL38360.1
ATPase, AFG1 family protein.
       0.707
EFL38359.1
5-amino-6-(5-phosphoribosylamino)uracil reductase (Riboflavin biosynthesis protein RibD); Truncated CDS.
   
   0.698
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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