STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38369.1Conserved hypothetical protein. (241 aa)    
Predicted Functional Partners:
EFL38368.1
Conserved hypothetical protein.
       0.829
EFL38367.1
Polysaccharide deacetylase.
       0.796
EFL41946.1
Conserved hypothetical protein.
  
 
   0.698
EFL41998.1
Integral membrane transporter.
     
 0.680
EFL38371.1
AP endonuclease, family 2.
       0.677
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
   
   0.664
EFL41789.1
Cyclase/dehydrase.
  
  
  0.656
EFL38366.1
Rieske family iron-sulfur cluster-binding protein.
  
    0.646
EFL38372.1
Integral membrane protein.
       0.645
EFL40452.1
Electron transporter SCO1/SenC.
     
 0.634
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.