STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38371.1AP endonuclease, family 2. (435 aa)    
Predicted Functional Partners:
EFL38372.1
Integral membrane protein.
       0.764
EFL42703.1
Secreted protein.
 
     0.700
EFL38369.1
Conserved hypothetical protein.
       0.677
EFL38368.1
Conserved hypothetical protein.
       0.663
EFL38173.1
DoxX subfamily protein.
 
  
 0.652
EFL37509.1
Calcium-translocating P-type ATPase, PMCA-type; Truncated CDS; unextendable partial coding region.
   
    0.638
EFL37745.1
Calcium-translocating P-type ATPase, PMCA-type.
   
    0.638
EFL40739.1
E1-E2 family cation-transporting ATPase.
   
    0.638
EFL38367.1
Polysaccharide deacetylase.
       0.630
EFL39612.1
Integral membrane protein.
  
  
 0.618
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.