STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38378.1Conserved domain-containing protein. (71 aa)    
Predicted Functional Partners:
EFL41632.1
Dimodular nonribosomal peptide synthetase; Truncated CDS.
 
 0.998
EFL41641.1
Non-ribosomal peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.998
EFL43270.1
Dimodular nonribosomal peptide synthetase; Truncated CDS.
 
 0.998
EFL37539.1
Condensation domain-containing protein; Unextendable partial coding region.
 
 0.996
EFL37540.1
Condensation domain-containing protein.
 
 0.996
EFL39371.1
Syringomycin synthetase.
 
 0.996
EFL41633.1
Non-ribosomal peptide synthetase.
 
 0.996
EFL41636.1
Dimodular nonribosomal peptide synthetase.
 
 0.995
EFL42379.1
Linear gramicidin synthetase LgrD.
 
 0.995
EFL37388.1
Linear gramicidin synthetase LgrD.
 
 0.993
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.