Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL38380.1Histidine kinase. (413 aa)    
Predicted Functional Partners:
EFL38381.1
Two-component system, regulatory protein.
 
  0.976
EFL38760.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
  
 0.887
EFL38759.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
  
 0.858
EFL42602.1
Response regulator, two-component system.
  
  0.792
EFL42984.1
Response regulator, two-component system.
  
  0.786
EFL39075.1
Two-component system response regulator.
  
  0.783
EFL37891.1
Two-component system response regulator; Truncated CDS; unextendable partial coding region.
  
  0.782
EFL39995.1
Two-component system response regulator.
  
  0.782
EFL40194.1
Two-component system response regulator.
  
  0.782
EFL40576.1
Two-component system response regulator.
  
  0.782
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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