STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL38382.1Conserved hypothetical protein. (104 aa)    
Predicted Functional Partners:
EFL37540.1
Condensation domain-containing protein.
 
 
 0.954
EFL37539.1
Condensation domain-containing protein; Unextendable partial coding region.
 
 
 0.951
EFL38164.1
Isochorismatase.
 
 0.947
EFL43486.1
Non-ribosomal peptide synthetase/polyketide synthase Ta1; Truncated CDS; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 0.913
EFL41632.1
Dimodular nonribosomal peptide synthetase; Truncated CDS.
 
 
 0.903
EFL38378.1
Conserved domain-containing protein.
 
  0.893
EFL39371.1
Syringomycin synthetase.
 
 0.892
EFL42381.1
Conserved domain-containing protein.
 
  0.889
EFL41624.1
Conserved domain-containing protein.
 
  0.883
EFL38630.1
Mycobactin biosynthesis enzyme MbtB.
 
  0.854
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.